CMSB - Centre for Medical Systems Biology CMSB - Centre for Medical Systems Biology
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Centre for Medical Systems Biology
Contact: PGM van Overveld
Phone: +31-71-526 9551
Fax: +31-71-526 8285
E-mail info@cmsb.nl

Correspondence:
LUMC
PO Box 9600
2300 RC
Leiden
The Netherlands

Visiting address:
LUMC, Building 2
Einthovenweg 20
2333 ZC
Leiden

Suggestions regarding the website - webmaster@cmsb.nl

 Last modified 2008/02/27 13:33:38 CET Printer friendly page  Printer friendly page 
Epidemiology Systems Biology Technology Model Systems Clinical Applications Data Integration, Analysis and Logistics (DIAL) Societal Aspects of Genomics (MAG-CMSB) Centre for Medical Systems Biology

CMSB Structure

The CMSB operates under general directorship of Professor dr. Gert-Jan B. van Ommen (LUMC).
Dr. Frans van der Touw (LUMC) is administrative manager.
The CMSB research is structured in five complementary research platforms:

The first two platforms have their main emphasis on the discovery phase of our reseach.
The next two platforms focus on the validation phase, and the clinical platform aims at the translational phase, where clinical trials are performed. The DIAL platform has a coordinating function and the societal platform has as its focus the effects of public implementation of innovative medical knowledge and treatments.

Overview of the CMSB structure - the five closely interacting topical projects, integrated by DIAL and one encompassing activity, MAG-CMSB

Epidemiology

Coordinators: Prof dr Cornelia M. van Duijn (EMC) and Prof dr Peter Heutink (VUmc)
Goals: To collect, catalogue and store clinical data and biological material of patient cohorts and control populations; to facilitate, coordinate and oversee their usage in the CMSB; to integrate and expand existing equipment and methodology for high-throughput haplotying; to develop education in molecular/statistical epidemiology.


Systems Biology

Coordinators: Prof dr Jan van der Greef (TNO) and Prof dr Guus A.B. Smit (VU)
Goals: To generate and integrate high-density quantitative data from gene expression and -dosage analysis, proteomics and metabolomics; to coordinate use of existing and acquisition of new methodology and equipment for high-throughput automated analysis; to study disease loci for their mechanistic contribution to initiation and progression of complex disease; to facilitate information exchange and develop education in the various areas of systems biology.


Technology

Coordinator: Prof dr Huub J.M. de Groot (UL)
Goals: To design and apply methodology for the assays of biomolecular interactions; to develop in vitro and cellular functional screens for pathway identification and target validation; to determine structures and ligand binding properties of newly identified proteins; to implement high-resolution in vivo magnetic resonance microscopy (MRM) for animal models; to facilitate information exchange and develop education in genomics technology.


Model Systems

Coordinator: Prof dr Rune R. Frants (LUMC)
Goals: To coordinate and where possible integrate animal experimentation for gene discovery; to establish animal functional screens for pathway identification and target validation; to expand existing and implement new methodology for conditional mouse models, RNAi approaches and in vivo real-time imaging and spectroscopy, using magnetic resonance and luminiscence.


Clinical Applications

Coordinator: Prof dr Cornelis J.M. Melief (LUMC)
Goals: To integrate insights and deliverables from the above projects in the improvement of diagnostics, prognostics, and therapy; to identify and validate molecular targets for therapy and prophylaxis in human and animal studies; to deliver proof-of-principle for new therapeutic strategies; to assist industrial partners in preclinical and epidemilogical toxicology studies and drug validation; to facilitate information exchange and develop education in the impact of genomics in health care, both to professionals and the larger public.


Data Integration, Analysis and Logistics (DIAL)

Coordinator: Dr J.H van Beek (VUmc)
Goals: To interface local databases; to establish a central database for experimental information; to develop biostatistics for the interlinking of Epidemiological and Systems Biology approaches; to implement commercial and develop in-house bioinformatics for the internal and external data mining and integration of all projects; to collaborate, within the BioASP framework, on the development of biostatistics, bioinformatics and GRID-based Virtual Laboratory Software; to develop education in biostatistics and bioinformatics.
Website: dial.liacs.nl


Societal Aspects of Genomics (MAG-CMSB)

Coordinator: Prof dr. Martina C. Cornel (VUmc)
Goals: To study ethical, legal, psychological and societal aspects of genomics applications in the field of complex diseases; to study the implementation of genetic screening and help to identify ways to proceed with further implementation; to develop education and stimulate debate on societal aspects of genomics; to create a multidisciplinary network of experts that know the past and present debate on valorisation and implementation of genomics applications in Dutch healtcare, especially in the domain of preventive medicine.


Relevant links for Societal aspects of health genomics
Leiden Muscular Dystrophy pages
Department of Medical Decision Making, LUMC
EMGO institute, VUmc
TNO kwaliteit van leven, afd. preventie en zorg
Department of Public Health ErasmusMC
Department of Clinical Genetics ErasmusMC
Department of Medical Psychology and Psychotherapy ErasmusMC
Prof W. Drees, Faculty of Theology, Leiden University
Center for Society and Genomics - CSG
Cancer Genomics Center - CGC
Center for Biosystems Genomics
Kluyver Center
Wat is genomics





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